CDS

Accession Number TCMCG016C16340
gbkey CDS
Protein Id OMO73288.1
Location join(39765..39930,40469..40569,40978..41084,41237..41272,41457..41542,41808..41866,41945..42055,42159..42284,42709..42852,43366..43474,43597..43733,43844..43879,43978..44070)
Organism Corchorus capsularis
locus_tag CCACVL1_17348

Protein

Length 436aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011250.1
Definition hypothetical protein CCACVL1_17348 [Corchorus capsularis]
Locus_tag CCACVL1_17348

EGGNOG-MAPPER Annotation

COG_category Z
Description Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14863        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070545        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAATTGACAGAGACAACAATGATGACAACTCAAGGAGGATTCAAGTGAGATTTGTAACGAAGCTAAAAGCTCCGTATAAAGTACCCACCACAGCCATTGCCATTCCTTCTGACCTCTCACGTTTAGGCCTTTCCTCCATTGTTAACAACCTTCTTCAAGCTGTAAATTCTGAGTGGAAAACTGAGCCCTTTGATTTCCTAATCGATGGAGAGCTGGTTCGGATGTCACTTGAGCAGTTTCTTATTGCCAAGGGCATATCTGCGGAGAAAATTTTGGAAGTTGAATACATAAGAGCTGTTGCCCCTCGAAAGGAGGAAGAACCTTCTCCACATGATGATTGGGTTAGTGCAGTTGATGGTTCAAGTCCTAGGTTTATTTTGACTGGTTGCTATGATGGTCTGGGAAGGGTATGGAAAGAAGCTGGATTGTGTACACATATACTAGAAGGACATAGTGGTGCAATTTCTTCTGTTAGTGTCATCACATCAGAAGGGGCAGGAAGTGCTACAGTGGCTACTGCTTCAAAAGATCGAACTCTGAGGCTATGGAAGTTTGATGCAGATGATAACAGTGACCATCCTTCAAAGATAAGAGCATTCAAGATCTTGCGTGGGCATAATGCATCTGTACAAAGTGTTGCAGCAAATACTTCAGGAGATATGGTTTGCTCAGGTTCTTGGGATGCTACAATCAATTTATGGCGGACAAATGAGTCTGATACGGATGGGGATGTGGTTTCAATCAAGAAAAGAAAGGTTAATAATAAAGCTGAGGAATCTCAATCTGAGGGAGAGGCTGTCTCTACACTCGTGGGTCATACACAATGTGTTTCATGTGTGGTTTGGCCTCGAAAAGAGACAATTTTTTCTGCATCGTGGGATCATTCTGTTAGGCAATGGGATGCTGAAACAGGCAAAGATGTGTCAGATATATTCTGCGGCAAAGTCCTTAACTGCATTGATATAGGAGGTGAAGGATCGGCTCTTATTGCTGCAGGTGGTTCTGACCCAATTCTTAGAATATGGGATCCTCGTAAGCCAGGATCATCGGCACCTGTATTTCAGTTCTCTTCACATAGTTCTTGGATTTCGACTTGCAAGTGGCACAATAGTTCTTCTCTTCATTTGCTTTCTTCCTCTTATGATGGGAAAGTAATGTTGTGGGATCTGAGAACAGCGTGGCCTCTATCTATCATCGATACACACAAGGACAAGGTATTATGTGCTGACTGGTGGAAGGGTGATAGTGTGGTAAGCGGTGGGGCGGACACACAGCTCCGTATTTCCTCGGACATCTTTATCCAGTGA
Protein:  
MEIDRDNNDDNSRRIQVRFVTKLKAPYKVPTTAIAIPSDLSRLGLSSIVNNLLQAVNSEWKTEPFDFLIDGELVRMSLEQFLIAKGISAEKILEVEYIRAVAPRKEEEPSPHDDWVSAVDGSSPRFILTGCYDGLGRVWKEAGLCTHILEGHSGAISSVSVITSEGAGSATVATASKDRTLRLWKFDADDNSDHPSKIRAFKILRGHNASVQSVAANTSGDMVCSGSWDATINLWRTNESDTDGDVVSIKKRKVNNKAEESQSEGEAVSTLVGHTQCVSCVVWPRKETIFSASWDHSVRQWDAETGKDVSDIFCGKVLNCIDIGGEGSALIAAGGSDPILRIWDPRKPGSSAPVFQFSSHSSWISTCKWHNSSSLHLLSSSYDGKVMLWDLRTAWPLSIIDTHKDKVLCADWWKGDSVVSGGADTQLRISSDIFIQ